AT5G10380 (ATRING1, RING1)


Aliases : ATRING1, RING1

Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0001298 (SeedPlants) Phylogenetic Tree(s): OG_06_0001298_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G10380
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.04 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.05 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.08 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_29602 No alias RHA2 signal transducer of abscisic acid perception 0.04 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os01g20910.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g14990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g30020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g42610.1 No alias E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g42530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_101154g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_227897g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_37578g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_38494g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_759689g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Smo59303 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g100100.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g062040.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
BP GO:0002238 response to molecule of fungal origin IEP Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0009617 response to bacterium IEP Interproscan
BP GO:0009617 response to bacterium RCA Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
BP GO:0010200 response to chitin IEP Interproscan
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0012501 programmed cell death IC Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
BP GO:0019761 glucosinolate biosynthetic process RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0035304 regulation of protein dephosphorylation RCA Interproscan
BP GO:0043068 positive regulation of programmed cell death IMP Interproscan
BP GO:0051865 protein autoubiquitination IDA Interproscan
Type GO Term Name Evidence Source
MF GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0001666 response to hypoxia IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006788 heme oxidation IEP Neighborhood
BP GO:0006882 cellular zinc ion homeostasis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009403 toxin biosynthetic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009625 response to insect IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009700 indole phytoalexin biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009759 indole glucosinolate biosynthetic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010044 response to aluminum ion IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010120 camalexin biosynthetic process IEP Neighborhood
BP GO:0010188 response to microbial phytotoxin IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010337 regulation of salicylic acid metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015368 calcium:cation antiporter activity IEP Neighborhood
MF GO:0015369 calcium:proton antiporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031063 regulation of histone deacetylation IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042343 indole glucosinolate metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046217 indole phytoalexin metabolic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
MF GO:0051139 metal ion:proton antiporter activity IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0052314 phytoalexin metabolic process IEP Neighborhood
BP GO:0052315 phytoalexin biosynthetic process IEP Neighborhood
BP GO:0052317 camalexin metabolic process IEP Neighborhood
BP GO:0055062 phosphate ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055069 zinc ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055081 anion homeostasis IEP Neighborhood
BP GO:0055083 monovalent inorganic anion homeostasis IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072505 divalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072506 trivalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0080181 lateral root branching IEP Neighborhood
BP GO:0090311 regulation of protein deacetylation IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1900055 regulation of leaf senescence IEP Neighborhood
BP GO:1900056 negative regulation of leaf senescence IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1902275 regulation of chromatin organization IEP Neighborhood
BP GO:1905622 negative regulation of leaf development IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 134 177
No external refs found!