MA_10430919g0010

Description : component Sec24 of Sec23/24 cargo adaptor subcomplex

Gene families : OG0001187 (Archaeplastida) Phylogenetic Tree(s): OG0001187_tree ,
OG_05_0003933 (LandPlants) Phylogenetic Tree(s): OG_05_0003933_tree ,
OG_06_0005426 (SeedPlants) Phylogenetic Tree(s): OG_06_0005426_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10430919g0010
Cluster	HCCA: Cluster_523

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00084390	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
AMTR_s00071p00045940	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.06	Archaeplastida
AT3G07100	ERMO2, SEC24A	Sec23/Sec24 protein transport family protein	0.05	Archaeplastida
AT3G44340	CEF	clone eighty-four	0.03	Archaeplastida
Cre01.g035850	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
Cre02.g091150	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
GSVIVT01014261001	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.09	Archaeplastida
GSVIVT01014611001	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.09	Archaeplastida
Gb_11357	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	Archaeplastida
Gb_26869	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
Gb_38621	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.06	Archaeplastida
LOC_Os04g04020.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	Archaeplastida
LOC_Os12g24250.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.04	Archaeplastida
Mp7g13350.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.03	Archaeplastida
Mp7g13560.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.06	Archaeplastida
Pp3c1_22900V3.1	No alias	clone eighty-four	0.03	Archaeplastida
Pp3c2_16660V3.1	No alias	Sec23/Sec24 protein transport family protein	0.03	Archaeplastida
Smo140536	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	Archaeplastida
Smo157789	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
Solyc02g082220.3.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.1	Archaeplastida
Solyc06g084210.3.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.07	Archaeplastida
Zm00001e008766_P001	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.11	Archaeplastida
Zm00001e021459_P002	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.09	Archaeplastida
Zm00001e040573_P001	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.13	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003714	transcription corepressor activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
BP	GO:0016197	endosomal transport	IEP	Neighborhood
MF	GO:0016409	palmitoyltransferase activity	IEP	Neighborhood
BP	GO:0016482	cytosolic transport	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0022406	membrane docking	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
CC	GO:0030906	retromer, cargo-selective complex	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:0140056	organelle localization by membrane tethering	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012990	Sec23_24_beta_S	176	260
IPR006896	Sec23/24_trunk_dom	1	170
IPR006900	Sec23/24_helical_dom	271	374

External Links

No external refs found!

MA_10430919g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation