AT1G22130 (AGL104)

Aliases : AGL104

Description : AGAMOUS-like 104

Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G22130
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00214260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	Archaeplastida
Cpa\|evm.model.tig00000944.9	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.02	Archaeplastida
GSVIVT01000802001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.03	Archaeplastida
GSVIVT01012249001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.02	Archaeplastida
GSVIVT01022182001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.05	Archaeplastida
Gb_12581	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
LOC_Os06g11970.1	No alias	transcription factor (MADS/AGL)	0.05	Archaeplastida
LOC_Os08g38590.1	No alias	transcription factor (MADS/AGL)	0.06	Archaeplastida
Pp3c12_22890V3.1	No alias	AGAMOUS-like 66	0.03	Archaeplastida
Pp3c4_3820V3.1	No alias	AGAMOUS-like 66	0.02	Archaeplastida
Zm00001e030839_P001	No alias	transcription factor (MADS/AGL)	0.08	Archaeplastida
Zm00001e036127_P002	No alias	transcription factor (MADS/AGL)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009555	pollen development	IGI	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002790	peptide secretion	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004630	phospholipase D activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005093	Rab GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005388	calcium-transporting ATPase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005770	late endosome	IEP	Neighborhood
CC	GO:0005884	actin filament	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006882	cellular zinc ion homeostasis	IEP	Neighborhood
BP	GO:0006885	regulation of pH	IEP	Neighborhood
BP	GO:0007204	positive regulation of cytosolic calcium ion concentration	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
BP	GO:0009830	cell wall modification involved in abscission	IEP	Neighborhood
MF	GO:0009916	alternative oxidase activity	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
MF	GO:0015204	urea transmembrane transporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0015840	urea transport	IEP	Neighborhood
MF	GO:0016004	phospholipase activator activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Neighborhood
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
BP	GO:0017157	regulation of exocytosis	IEP	Neighborhood
BP	GO:0019755	one-carbon compound transport	IEP	Neighborhood
BP	GO:0019953	sexual reproduction	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Neighborhood
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	Neighborhood
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
BP	GO:0044277	cell wall disassembly	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0050848	regulation of calcium-mediated signaling	IEP	Neighborhood
BP	GO:0050850	positive regulation of calcium-mediated signaling	IEP	Neighborhood
BP	GO:0051046	regulation of secretion	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood
BP	GO:0051480	regulation of cytosolic calcium ion concentration	IEP	Neighborhood
BP	GO:0051648	vesicle localization	IEP	Neighborhood
BP	GO:0051650	establishment of vesicle localization	IEP	Neighborhood
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
MF	GO:0060229	lipase activator activity	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:0099080	supramolecular complex	IEP	Neighborhood
CC	GO:0099081	supramolecular polymer	IEP	Neighborhood
CC	GO:0099512	supramolecular fiber	IEP	Neighborhood
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Neighborhood
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	Neighborhood
BP	GO:1901879	regulation of protein depolymerization	IEP	Neighborhood
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1903530	regulation of secretion by cell	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	55

External Links

No external refs found!

AT1G22130 (AGL104)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation