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  5. AT5G22450

AT5G22450


Description : unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0002472 (Archaeplastida) Phylogenetic Tree(s): OG0002472_tree ,
OG_05_0001862 (LandPlants) Phylogenetic Tree(s): OG_05_0001862_tree ,
OG_06_0002456 (SeedPlants) Phylogenetic Tree(s): OG_06_0002456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22450
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015158001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
LOC_Os01g73620.1 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
LOC_Os05g01690.1 No alias component ADA3 of SAGA transcription co-activator complex 0.04 Archaeplastida
Pp3c15_5990V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_790V3.1 No alias No annotation 0.03 Archaeplastida
Smo407119 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Zm00001e018678_P002 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e027665_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e029688_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003978 UDP-glucose 4-epimerase activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008490 arsenite secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0008559 xenobiotic transmembrane transporting ATPase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
CC GO:0010319 stromule IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015086 cadmium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015446 ATPase-coupled arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015691 cadmium ion transport IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042343 indole glucosinolate metabolic process IEP Neighborhood
BP GO:0042344 indole glucosinolate catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0042946 glucoside transport IEP Neighborhood
MF GO:0042947 glucoside transmembrane transporter activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043225 ATPase-coupled anion transmembrane transporter activity IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0052482 defense response by cell wall thickening IEP Neighborhood
BP GO:0052543 callose deposition in cell wall IEP Neighborhood
BP GO:0052544 defense response by callose deposition in cell wall IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071366 cellular response to indolebutyric acid stimulus IEP Neighborhood
BP GO:0071407 cellular response to organic cyclic compound IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080026 response to indolebutyric acid IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901656 glycoside transport IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
MF GO:1901683 arsenate ion transmembrane transporter activity IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
MF GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity IEP Neighborhood
BP GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!