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  5. MA_1763g0010

MA_1763g0010


Description : La-related protein 1A OS=Arabidopsis thaliana (sp|q940x9|lrp1a_arath : 117.0)


Gene families : OG0001423 (Archaeplastida) Phylogenetic Tree(s): OG0001423_tree ,
OG_05_0001373 (LandPlants) Phylogenetic Tree(s): OG_05_0001373_tree ,
OG_06_0005625 (SeedPlants) Phylogenetic Tree(s): OG_06_0005625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1763g0010
Cluster HCCA: Cluster_516

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Cpa|evm.model.tig00000498.93 No alias No description available 0.02 Archaeplastida
Cre10.g441200 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
GSVIVT01006333001 No alias La-related protein 1C OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029892001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
Gb_04152 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.11 Archaeplastida
Gb_28833 No alias XRN4-exoribonuclease cofactor (LARP1) 0.04 Archaeplastida
LOC_Os01g16110.1 No alias XRN4-exoribonuclease cofactor (LARP1) 0.02 Archaeplastida
LOC_Os03g64190.1 No alias La-related protein 1B OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_113816g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c11_24960V3.1 No alias LA RNA-binding protein 0.03 Archaeplastida
Pp3c7_8450V3.1 No alias LA RNA-binding protein 0.03 Archaeplastida
Solyc02g061980.3.1 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g081820.3.1 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g073550.3.1 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 Archaeplastida
Zm00001e025537_P001 No alias XRN4-exoribonuclease cofactor (LARP1) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR006630 La_HTH 289 344
No external refs found!