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  5. MA_22853g0010

MA_22853g0010


Description : Reticulon-like protein B21 OS=Arabidopsis thaliana (sp|q56x72|rtnls_arath : 166.0)


Gene families : OG0003270 (Archaeplastida) Phylogenetic Tree(s): OG0003270_tree ,
OG_05_0002482 (LandPlants) Phylogenetic Tree(s): OG_05_0002482_tree ,
OG_06_0002417 (SeedPlants) Phylogenetic Tree(s): OG_06_0002417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_22853g0010
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.12 Archaeplastida
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.08 Archaeplastida
AT2G20590 No alias Reticulon family protein 0.05 Archaeplastida
AT4G28430 No alias Reticulon family protein 0.02 Archaeplastida
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os02g19990.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Pp3c12_15930V3.1 No alias Reticulon family protein 0.07 Archaeplastida
Pp3c4_8810V3.1 No alias Reticulon family protein 0.03 Archaeplastida
Solyc07g053700.4.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e024730_P001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 295 449
No external refs found!