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  5. AT5G50260

AT5G50260


Description : Cysteine proteinases superfamily protein


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0002750 (SeedPlants) Phylogenetic Tree(s): OG_06_0002750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50260
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00031000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 Archaeplastida
AMTR_s00061p00214890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00061p00215070 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
AMTR_s00061p00215230 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00090p00106390 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.04 Archaeplastida
AT2G22160 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT3G48340 No alias Cysteine proteinases superfamily protein 0.05 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.05 Archaeplastida
Cre09.g407700 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.09 Archaeplastida
GSVIVT01009796001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020698001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01021194001 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
GSVIVT01021223001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_10444 No alias protease (Papain) 0.04 Archaeplastida
Gb_12857 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
Gb_31936 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os04g55650.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g57440.1 No alias Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.05 Archaeplastida
LOC_Os12g17540.1 No alias protease (Papain) 0.03 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.03 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c18_11500V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c19_6730V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c8_20370V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Solyc02g076750.3.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc02g076910.3.1 No alias protease (Papain) 0.04 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.11 Archaeplastida
Solyc05g013920.4.1 No alias protease (Papain) 0.05 Archaeplastida
Solyc07g053460.4.1 No alias Senescence-specific cysteine protease SAG12... 0.06 Archaeplastida
Solyc12g088670.2.1 No alias Low-temperature-induced cysteine proteinase (Fragment)... 0.04 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006508 proteolysis ISS Interproscan
MF GO:0008234 cysteine-type peptidase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Neighborhood
MF GO:0004108 citrate (Si)-synthase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006624 vacuolar protein processing IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008493 tetracycline transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010262 somatic embryogenesis IEP Neighborhood
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Neighborhood
BP GO:0010373 negative regulation of gibberellin biosynthetic process IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
MF GO:0031176 endo-1,4-beta-xylanase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032351 negative regulation of hormone metabolic process IEP Neighborhood
BP GO:0032353 negative regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
MF GO:0033613 activating transcription factor binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036440 citrate synthase activity IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042895 antibiotic transmembrane transporter activity IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0045827 negative regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0045833 negative regulation of lipid metabolic process IEP Neighborhood
BP GO:0045834 positive regulation of lipid metabolic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
MF GO:0051777 ent-kaurenoate oxidase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0062013 positive regulation of small molecule metabolic process IEP Neighborhood
BP GO:0062014 negative regulation of small molecule metabolic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1902066 regulation of cell wall pectin metabolic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 38 93
IPR000668 Peptidase_C1A_C 126 341
No external refs found!