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  5. MA_66453g0010

MA_66453g0010


Description : component NUF2 of NDC80 outer kinetochore complex


Gene families : OG0004734 (Archaeplastida) Phylogenetic Tree(s): OG0004734_tree ,
OG_05_0004703 (LandPlants) Phylogenetic Tree(s): OG_05_0004703_tree ,
OG_06_0004003 (SeedPlants) Phylogenetic Tree(s): OG_06_0004003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_66453g0010
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.65 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 Archaeplastida
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 Archaeplastida
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.02 Archaeplastida
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.03 Archaeplastida
Zm00001e006361_P001 No alias component NUF2 of NDC80 outer kinetochore complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEA Interproscan
CC GO:0031262 Ndc80 complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2 4 142
No external refs found!