1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G66940

AT5G66940


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G66940
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.03 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
GSVIVT01003947001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01031841001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os09g29960.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.05 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.02 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc01g096120.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g065290.1.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.07 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.09 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e003086_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019764_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e028042_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032133_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0003999 adenine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004301 epoxide hydrolase activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009943 adaxial/abaxial axis specification IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009946 proximal/distal axis specification IEP Neighborhood
BP GO:0009947 centrolateral axis specification IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010158 abaxial cell fate specification IEP Neighborhood
BP GO:0010159 specification of animal organ position IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010450 inflorescence meristem growth IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010865 stipule development IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016803 ether hydrolase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0047434 indolepyruvate decarboxylase activity IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048448 stamen morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048455 stamen formation IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0106130 purine phosphoribosyltransferase activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 30 86
No external refs found!