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Description : ubiquitin ligase component HRD1 of ER-associated protein degradation (ERAD) machinery
Gene families : OG0005035 (Archaeplastida) Phylogenetic Tree(s): OG0005035_tree ,
OG_05_0005501 (LandPlants) Phylogenetic Tree(s): OG_05_0005501_tree ,
OG_06_0005735 (SeedPlants) Phylogenetic Tree(s): OG_06_0005735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_892125g0010 | |
| Cluster | HCCA: Cluster_277 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G16090 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| Solyc03g096930.4.1 | No alias | ubiquitin ligase component HRD1 of ER-associated protein... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003714 | transcription corepressor activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006887 | exocytosis | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
| BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030126 | COPI vesicle coat | IEP | Neighborhood |
| CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
| CC | GO:0042765 | GPI-anchor transamidase complex | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046903 | secretion | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 364 | 403 |
| No external refs found! |