Coexpression cluster: Cluster_277 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042147 retrograde transport, endosome to Golgi 2.2% (2/91) 8.19 1.8e-05 0.000889
GO:0016482 cytosolic transport 2.2% (2/91) 8.19 1.8e-05 0.000889
GO:0030906 retromer, cargo-selective complex 2.2% (2/91) 8.19 1.8e-05 0.000889
GO:0016197 endosomal transport 2.2% (2/91) 7.93 2.8e-05 0.000999
GO:0016458 gene silencing 2.2% (2/91) 6.71 0.000166 0.004014
GO:0031047 gene silencing by RNA 2.2% (2/91) 6.71 0.000166 0.004014
GO:0009892 negative regulation of metabolic process 2.2% (2/91) 5.99 0.000458 0.00738
GO:0010605 negative regulation of macromolecule metabolic process 2.2% (2/91) 5.99 0.000458 0.00738
GO:0010629 negative regulation of gene expression 2.2% (2/91) 6.06 0.000419 0.008671
GO:0048519 negative regulation of biological process 2.2% (2/91) 4.87 0.002165 0.031398
GO:0009582 detection of abiotic stimulus 1.1% (1/91) 7.19 0.00681 0.041145
GO:0009583 detection of light stimulus 1.1% (1/91) 7.19 0.00681 0.041145
GO:0009584 detection of visible light 1.1% (1/91) 7.19 0.00681 0.041145
GO:0018298 protein-chromophore linkage 1.1% (1/91) 7.19 0.00681 0.041145
GO:0009581 detection of external stimulus 1.1% (1/91) 7.19 0.00681 0.041145
GO:0051606 detection of stimulus 1.1% (1/91) 7.19 0.00681 0.041145
GO:0009314 response to radiation 1.1% (1/91) 6.93 0.008167 0.043858
GO:0009416 response to light stimulus 1.1% (1/91) 6.93 0.008167 0.043858
GO:1904949 ATPase complex 1.1% (1/91) 6.93 0.008167 0.043858
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_24 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_43 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_91 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_224 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_248 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_277 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_118 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_97 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_185 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_317 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_72 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_177 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_200 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_204 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_53 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_109 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_3 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_9 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_210 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_221 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_484 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_138 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_166 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.047 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_264 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_139 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_83 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_105 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.019 Archaeplastida Compare
Sequences (91) (download table)

InterPro Domains

GO Terms

Family Terms