AMTR_s00001p00273020 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.586

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0001536 (SeedPlants) Phylogenetic Tree(s): OG_06_0001536_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00001p00273020
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00213730	No alias	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
AMTR_s00047p00138180	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
AT5G18370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Archaeplastida
AT5G44510	TAO1	target of AVRB operation1	0.02	Archaeplastida
Pp3c6_19080V3.1	No alias	target of AVRB operation1	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Neighborhood
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Neighborhood
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Neighborhood
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Neighborhood
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Neighborhood
MF	GO:0004363	glutathione synthase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006570	tyrosine metabolic process	IEP	Neighborhood
BP	GO:0006571	tyrosine biosynthetic process	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006750	glutathione biosynthetic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0008277	regulation of G-protein coupled receptor protein signaling pathway	IEP	Neighborhood
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Neighborhood
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0009968	negative regulation of signal transduction	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0010648	negative regulation of cell communication	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0019184	nonribosomal peptide biosynthetic process	IEP	Neighborhood
BP	GO:0023021	termination of signal transduction	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
BP	GO:0023057	negative regulation of signaling	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0038032	termination of G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0045744	negative regulation of G-protein coupled receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048585	negative regulation of response to stimulus	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
MF	GO:0061505	DNA topoisomerase II activity	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071897	DNA biosynthetic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	264	535
IPR000157	TIR_dom	3	131
IPR001611	Leu-rich_rpt	721	741

External Links

No external refs found!

AMTR_s00001p00273020 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation