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  5. AMTR_s00001p00273070

AMTR_s00001p00273070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.591

Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.GASA/GAST family.GASA precursor polypeptide


Gene families : OG0000833 (Archaeplastida) Phylogenetic Tree(s): OG0000833_tree ,
OG_05_0000496 (LandPlants) Phylogenetic Tree(s): OG_05_0000496_tree ,
OG_06_0001491 (SeedPlants) Phylogenetic Tree(s): OG_06_0001491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00273070
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT5G15230 GASA4 GAST1 protein homolog 4 0.03 Archaeplastida
GSVIVT01033563001 No alias Phytohormones.signalling peptides.CRP... 0.01 Archaeplastida
Gb_24074 No alias GASA precursor polypeptide 0.02 Archaeplastida
LOC_Os03g55290.1 No alias GASA precursor polypeptide 0.03 Archaeplastida
MA_132217g0010 No alias GASA precursor polypeptide 0.03 Archaeplastida
MA_24001g0010 No alias GASA precursor polypeptide 0.02 Archaeplastida
Solyc01g107370.3.1 No alias GASA precursor polypeptide 0.03 Archaeplastida
Solyc06g007920.3.1 No alias GASA precursor polypeptide 0.02 Archaeplastida
Solyc06g069790.4.1 No alias GASA precursor polypeptide 0.05 Archaeplastida
Solyc12g042520.3.1 No alias GASA precursor polypeptide 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003854 GASA 28 87
No external refs found!