LOC_Os01g18400.1

Description : Chitinase 10 OS=Oryza sativa subsp. japonica (sp|q5nb11|chi10_orysj : 484.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g18400.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.05	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.03	Archaeplastida
AMTR_s00001p00243680	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.05	Archaeplastida
AMTR_s00001p00243780	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.04	Archaeplastida
AMTR_s00001p00244170	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AMTR_s00001p00244240	evm_27.TU.AmTr_v1...	Endochitinase B OS=Nicotiana tabacum	0.03	Archaeplastida
AMTR_s00045p00134660	evm_27.TU.AmTr_v1...	Chitinase 10 OS=Oryza sativa subsp. japonica	0.06	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.06	Archaeplastida
AT1G02360	No alias	Chitinase family protein	0.06	Archaeplastida
AT2G43570	CHI	chitinase, putative	0.03	Archaeplastida
AT2G43580	No alias	Chitinase family protein	0.04	Archaeplastida
AT2G43590	No alias	Chitinase family protein	0.03	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.04	Archaeplastida
AT3G12500	HCHIB, B-CHI,...	basic chitinase	0.05	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.03	Archaeplastida
AT3G47540	No alias	Chitinase family protein	0.03	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.05	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
GSVIVT01031685001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
GSVIVT01038111001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038116001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.06	Archaeplastida
GSVIVT01038117001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01038120001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
Gb_05672	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Gb_07464	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_10203	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os02g39330.1	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os04g41680.1	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os10g39680.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.03	Archaeplastida
MA_10425967g0010	No alias	Basic endochitinase OS=Vitis vinifera...	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_448160g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_726207g0010	No alias	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_80085g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.05	Archaeplastida
MA_8921185g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.04	Archaeplastida
MA_8960362g0010	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.06	Archaeplastida
Mp2g24440.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.02	Archaeplastida
Mp4g20450.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 229.0)	0.02	Archaeplastida
Mp4g20470.1	No alias	Basic endochitinase B OS=Arabidopsis thaliana...	0.04	Archaeplastida
Mp7g04510.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Pp3c16_17090V3.1	No alias	homolog of carrot EP3-3 chitinase	0.03	Archaeplastida
Pp3c26_2880V3.1	No alias	Chitinase family protein	0.03	Archaeplastida
Pp3c6_130V3.1	No alias	basic chitinase	0.03	Archaeplastida
Smo426710	No alias	Endochitinase A OS=Zea mays	0.03	Archaeplastida
Smo443112	No alias	Basic endochitinase B OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g082960.3.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc10g055800.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.06	Archaeplastida
Solyc10g055820.3.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.03	Archaeplastida
Zm00001e002252_P001	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Zm00001e041138_P001	No alias	Endochitinase B (Fragment) OS=Zea mays...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	52	284

External Links

No external refs found!

LOC_Os01g18400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation