AMTR_s00002p00266760 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.512

Description : Auxin-responsive protein IAA16 OS=Arabidopsis thaliana

Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0000110 (SeedPlants) Phylogenetic Tree(s): OG_06_0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00266760
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AT1G04550	IAA12, BDL	AUX/IAA transcriptional regulator family protein	0.03	Archaeplastida
AT2G22670	IAA8	indoleacetic acid-induced protein 8	0.03	Archaeplastida
AT3G16500	PAP1, IAA26	phytochrome-associated protein 1	0.03	Archaeplastida
AT3G23050	AXR2, IAA7	indole-3-acetic acid 7	0.07	Archaeplastida
AT4G14550	SLR, IAA14	indole-3-acetic acid inducible 14	0.04	Archaeplastida
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.05	Archaeplastida
AT4G28640	IAA11	indole-3-acetic acid inducible 11	0.03	Archaeplastida
AT4G29080	IAA27, PAP2	phytochrome-associated protein 2	0.02	Archaeplastida
AT5G25890	IAA28, IAR2	indole-3-acetic acid inducible 28	0.04	Archaeplastida
GSVIVT01017711001	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica	0.04	Archaeplastida
GSVIVT01036283001	No alias	Auxin-induced protein AUX28 OS=Glycine max	0.03	Archaeplastida
Gb_36562	No alias	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os01g08320.1	No alias	Auxin-responsive protein IAA1 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os02g49160.1	No alias	Auxin-responsive protein IAA8 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os03g43400.1	No alias	Auxin-responsive protein IAA11 OS=Oryza sativa subsp....	0.05	Archaeplastida
LOC_Os03g43410.1	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.06	Archaeplastida
LOC_Os03g58350.1	No alias	Auxin-responsive protein IAA14 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os05g44810.2	No alias	repressor component Aux/IAA of auxin receptor complex	0.03	Archaeplastida
LOC_Os06g07040.1	No alias	Auxin-responsive protein IAA20 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os06g22870.1	No alias	Auxin-responsive protein IAA21 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os12g40890.1	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os12g40900.1	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.06	Archaeplastida
MA_10431093g0030	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.04	Archaeplastida
MA_123046g0010	No alias	repressor component Aux/IAA of auxin receptor complex	0.04	Archaeplastida
MA_14280g0010	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_38g0010	No alias	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_8842034g0010	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Smo116126	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
Solyc06g053830.3.1	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc08g021820.3.1	No alias	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc09g064530.3.1	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e005073_P001	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.05	Archaeplastida
Zm00001e005351_P001	No alias	Auxin-responsive protein IAA5 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e011863_P002	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.05	Archaeplastida
Zm00001e012059_P002	No alias	Auxin-responsive protein IAA13 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e012423_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e017434_P002	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e018053_P002	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e018054_P001	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003311	AUX_IAA	7	230

External Links

No external refs found!

AMTR_s00002p00266760 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation