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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g41670.1 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| AMTR_s00024p00201930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| AMTR_s00024p00202590 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| AMTR_s00032p00159210 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AMTR_s00148p00088930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | Archaeplastida | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.07 | Archaeplastida | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.04 | Archaeplastida | |
| GSVIVT01006148001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01015123001 | No alias | Phenylalanine ammonia-lyase OS=Pinus taeda | 0.07 | Archaeplastida | |
| GSVIVT01015124001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.08 | Archaeplastida | |
| GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| GSVIVT01024293001 | No alias | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... | 0.03 | Archaeplastida | |
| GSVIVT01024294001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| GSVIVT01024295001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| GSVIVT01024299001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024306001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024315001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| Gb_10978 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_16672 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Gb_31408 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_41796 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os02g41630.2 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os04g43760.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_15852g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| MA_189052g0010 | No alias | Phenylalanine ammonia-lyase OS=Pinus taeda... | 0.02 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Mp4g10060.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Mp4g14110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14210.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp7g14880.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Pp3c10_21810V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.08 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.04 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.04 | Archaeplastida | |
| Pp3c1_18680V3.1 | No alias | phenyl alanine ammonia-lyase 3 | 0.02 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| Pp3c21_7640V3.1 | No alias | phenylalanine ammonia-lyase 2 | 0.04 | Archaeplastida | |
| Pp3c21_7670V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c21_7680V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.04 | Archaeplastida | |
| Pp3c24_13110V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c2_32330V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.08 | Archaeplastida | |
| Pp3c2_32410V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Solyc00g500095.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Solyc00g500353.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Solyc03g042560.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Solyc03g078280.3.1 | No alias | Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... | 0.04 | Archaeplastida | |
| Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc09g007910.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Solyc10g011925.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e005064_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
| Zm00001e015155_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Zm00001e015156_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e023032_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
| BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
| BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006887 | exocytosis | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| CC | GO:0031012 | extracellular matrix | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044421 | extracellular region part | IEP | Neighborhood |
| CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0046903 | secretion | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 62 | 530 |
| No external refs found! |