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  5. LOC_Os02g56540.1

LOC_Os02g56540.1


Description : microtubule-based motor protein (Kinesin-10). motor protein (Kinesin-10)


Gene families : OG0003206 (Archaeplastida) Phylogenetic Tree(s): OG0003206_tree ,
OG_05_0004405 (LandPlants) Phylogenetic Tree(s): OG_05_0004405_tree ,
OG_06_0006945 (SeedPlants) Phylogenetic Tree(s): OG_06_0006945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56540.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT4G14330 No alias P-loop containing nucleoside triphosphate hydrolases... 0.29 Archaeplastida
Cpa|evm.model.tig00000093.35 No alias Kinesin-like protein KIN-14D OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre03.g173700 No alias Kinesin-like protein KIN-8B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027849001 No alias Kinesin-like protein KIN-10A OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01027850001 No alias Cytoskeleton.microtubular network.Kinesin... 0.19 Archaeplastida
Gb_21076 No alias microtubule-based motor protein (Kinesin-10). motor... 0.02 Archaeplastida
MA_285695g0010 No alias microtubule-based motor protein (Kinesin-10). motor... 0.03 Archaeplastida
Mp7g16640.1 No alias microtubule-based motor protein (Kinesin-10). motor... 0.17 Archaeplastida
Pp3c14_20330V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.1 Archaeplastida
Pp3c17_18420V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.09 Archaeplastida
Smo412550 No alias Cytoskeleton.microtubular network.Kinesin... 0.11 Archaeplastida
Smo97490 No alias Cytoskeleton.microtubular network.Kinesin... 0.12 Archaeplastida
Solyc03g005620.4.1 No alias microtubule-based motor protein (Kinesin-10). motor... 0.31 Archaeplastida
Solyc09g090320.2.1 No alias microtubule-based motor protein (Kinesin-10). motor... 0.33 Archaeplastida
Zm00001e016184_P001 No alias microtubule-based motor protein (Kinesin-10). motor... 0.29 Archaeplastida
Zm00001e023628_P001 No alias microtubule-based motor protein (Kinesin-10). motor... 0.24 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 76 372
No external refs found!