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  5. LOC_Os03g05040.1

LOC_Os03g05040.1


Description : meiotic crossover accessory protein (FLIP)


Gene families : OG0008002 (Archaeplastida) Phylogenetic Tree(s): OG0008002_tree ,
OG_05_0007775 (LandPlants) Phylogenetic Tree(s): OG_05_0007775_tree ,
OG_06_0009577 (SeedPlants) Phylogenetic Tree(s): OG_06_0009577_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05040.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
MA_450197g0010 No alias meiotic crossover accessory protein (FLIP) 0.03 Archaeplastida
Mp1g24360.1 No alias meiotic crossover accessory protein (FLIP) 0.02 Archaeplastida
Smo410230 No alias Cell cycle.mitosis and meiosis.meiotic... 0.02 Archaeplastida
Zm00001e000358_P001 No alias meiotic crossover accessory protein (FLIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027902 DUF4487 217 768
No external refs found!