AMTR_s00004p00017950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.4

No description available


Gene families : OG0007994 (Archaeplastida) Phylogenetic Tree(s): OG0007994_tree ,
OG_05_0006452 (LandPlants) Phylogenetic Tree(s): OG_05_0006452_tree ,
OG_06_0006041 (SeedPlants) Phylogenetic Tree(s): OG_06_0006041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00017950
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G05440 No alias C-8 sterol isomerases 0.05 Archaeplastida
GSVIVT01017997001 No alias No description available 0.09 Archaeplastida
Gb_09200 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g53580.1 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_10102998g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10102999g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_561472g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc09g082180.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e005662_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000247 C-8 sterol isomerase activity IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006696 ergosterol biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
InterPro domains Description Start Stop
IPR006716 ERG2_sigma1_rcpt-like 200 299
No external refs found!