AT1G30230

Description : Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6

Gene families : OG0001823 (Archaeplastida) Phylogenetic Tree(s): OG0001823_tree ,
OG_05_0001820 (LandPlants) Phylogenetic Tree(s): OG_05_0001820_tree ,
OG_06_0001499 (SeedPlants) Phylogenetic Tree(s): OG_06_0001499_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30230
Cluster	HCCA: Cluster_242

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000093.158	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.03	Archaeplastida
Cpa\|evm.model.tig00001126.9	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.02	Archaeplastida
LOC_Os07g46750.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.04	Archaeplastida
MA_8253027g0010	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.02	Archaeplastida
Zm00001e035548_P001	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005853	eukaryotic translation elongation factor 1 complex	ISS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006414	translational elongation	ISS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009808	lignin metabolic process	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
BP	GO:0032950	regulation of beta-glucan metabolic process	None	Extended
BP	GO:0032951	regulation of beta-glucan biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070726	cell wall assembly	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071668	plant-type cell wall assembly	IMP	Interproscan
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001006	regulation of cellulose biosynthetic process	IMP	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000247	C-8 sterol isomerase activity	IEP	Neighborhood
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004766	spermidine synthase activity	IEP	Neighborhood
MF	GO:0004798	thymidylate kinase activity	IEP	Neighborhood
CC	GO:0005654	nucleoplasm	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006366	transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
BP	GO:0010043	response to zinc ion	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Neighborhood
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Neighborhood
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	Neighborhood
BP	GO:0016925	protein sumoylation	IEP	Neighborhood
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019932	second-messenger-mediated signaling	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
MF	GO:0031386	protein tag	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
BP	GO:0060147	regulation of posttranscriptional gene silencing	IEP	Neighborhood
BP	GO:0060964	regulation of gene silencing by miRNA	IEP	Neighborhood
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
CC	GO:0071944	cell periphery	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	144	231

External Links

No external refs found!

AT1G30230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation