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  5. LOC_Os06g13180.1

LOC_Os06g13180.1


Description : Matrixin-type metalloprotease


Gene families : OG0001252 (Archaeplastida) Phylogenetic Tree(s): OG0001252_tree ,
OG_05_0000861 (LandPlants) Phylogenetic Tree(s): OG_05_0000861_tree ,
OG_06_0001192 (SeedPlants) Phylogenetic Tree(s): OG_06_0001192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13180.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.09 Archaeplastida
AMTR_s00106p00141160 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
AT1G24140 No alias Matrixin family protein 0.09 Archaeplastida
AT1G70170 MMP matrix metalloproteinase 0.05 Archaeplastida
GSVIVT01018206001 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
GSVIVT01020151001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 Archaeplastida
GSVIVT01032549001 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Gb_17716 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Gb_39954 No alias Matrixin-type metalloprotease 0.03 Archaeplastida
Gb_39955 No alias Matrixin-type metalloprotease 0.03 Archaeplastida
LOC_Os10g40859.1 No alias Matrixin-type metalloprotease 0.03 Archaeplastida
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.06 Archaeplastida
MA_364411g0010 No alias Matrixin-type metalloprotease 0.02 Archaeplastida
Mp3g07800.1 No alias Matrixin-type metalloprotease 0.02 Archaeplastida
Pp3c8_14810V3.1 No alias Matrixin family protein 0.03 Archaeplastida
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
Smo13930 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
Solyc04g005040.1.1 No alias Matrixin-type metalloprotease 0.07 Archaeplastida
Solyc04g005050.1.1 No alias Matrixin-type metalloprotease 0.08 Archaeplastida
Zm00001e015780_P001 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Zm00001e036059_P001 No alias Matrixin-type metalloprotease 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 62 122
IPR001818 Pept_M10_metallopeptidase 160 322
No external refs found!