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  5. LOC_Os06g50140.1

LOC_Os06g50140.1


Description : Endoglucanase 18 OS=Oryza sativa subsp. japonica (sp|q5z9p8|gun18_orysj : 943.0)


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0002876 (LandPlants) Phylogenetic Tree(s): OG_05_0002876_tree ,
OG_06_0003032 (SeedPlants) Phylogenetic Tree(s): OG_06_0003032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g50140.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT4G02290 AtGH9B13, GH9B13 glycosyl hydrolase 9B13 0.02 Archaeplastida
AT4G11050 AtGH9C3, GH9C3 glycosyl hydrolase 9C3 0.01 Archaeplastida
AT4G39010 GH9B18, AtGH9B18 glycosyl hydrolase 9B18 0.03 Archaeplastida
GSVIVT01037210001 No alias Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.02 Archaeplastida
Gb_09934 No alias Endoglucanase 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_21389 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida
MA_10241783g0010 No alias Endoglucanase 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c5_9540V3.1 No alias glycosyl hydrolase 9A1 0.02 Archaeplastida
Smo144066 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc04g081300.4.1 No alias Endoglucanase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015765_P001 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e023503_P001 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e034793_P002 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 50 503
No external refs found!