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Description : plastidial RNA processing factor (PPR287)
Gene families : OG0008036 (Archaeplastida) Phylogenetic Tree(s): OG0008036_tree ,
OG_05_0007862 (LandPlants) Phylogenetic Tree(s): OG_05_0007862_tree ,
OG_06_0010058 (SeedPlants) Phylogenetic Tree(s): OG_06_0010058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g09270.1 | |
| Cluster | HCCA: Cluster_218 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00083700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g59040... | 0.03 | Archaeplastida | |
| AT3G59040 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.17 | Archaeplastida | |
| GSVIVT01020809001 | No alias | Pentatricopeptide repeat-containing protein At3g59040... | 0.14 | Archaeplastida | |
| Gb_12237 | No alias | plastidial RNA processing factor (PPR287) | 0.03 | Archaeplastida | |
| MA_10437236g0010 | No alias | plastidial RNA processing factor (PPR287) | 0.04 | Archaeplastida | |
| Mp6g14500.1 | No alias | plastidial RNA processing factor (PPR287) | 0.08 | Archaeplastida | |
| Pp3c26_11100V3.1 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.14 | Archaeplastida | |
| Smo448320 | No alias | Pentatricopeptide repeat-containing protein At3g59040... | 0.07 | Archaeplastida | |
| Solyc07g043600.4.1 | No alias | plastidial RNA processing factor (PPR287) | 0.12 | Archaeplastida | |
| Zm00001e039973_P002 | No alias | plastidial RNA processing factor (PPR287) | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0050661 | NADP binding | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:2001070 | starch binding | IEP | Neighborhood |
| No external refs found! |