Coexpression cluster: Cluster_218 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016741 transferase activity, transferring one-carbon groups 11.11% (6/54) 4.25 1e-06 0.000114
GO:0008168 methyltransferase activity 11.11% (6/54) 4.31 1e-06 0.00018
GO:0008173 RNA methyltransferase activity 5.56% (3/54) 6.95 2e-06 0.000187
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 3.7% (2/54) 9.02 5e-06 0.000357
GO:0016423 tRNA (guanine) methyltransferase activity 3.7% (2/54) 7.8 3.4e-05 0.001991
GO:0008175 tRNA methyltransferase activity 3.7% (2/54) 7.29 7.2e-05 0.003546
GO:0006400 tRNA modification 3.7% (2/54) 6.52 0.000216 0.009134
GO:1902679 negative regulation of RNA biosynthetic process 1.85% (1/54) 9.61 0.00128 0.023679
GO:1903507 negative regulation of nucleic acid-templated transcription 1.85% (1/54) 9.61 0.00128 0.023679
GO:0006359 regulation of transcription by RNA polymerase III 1.85% (1/54) 9.61 0.00128 0.023679
GO:0051253 negative regulation of RNA metabolic process 1.85% (1/54) 9.61 0.00128 0.023679
GO:0016480 negative regulation of transcription by RNA polymerase III 1.85% (1/54) 9.61 0.00128 0.023679
GO:0045892 negative regulation of transcription, DNA-templated 1.85% (1/54) 9.61 0.00128 0.023679
GO:0016070 RNA metabolic process 7.41% (4/54) 3.02 0.001507 0.024776
GO:0008033 tRNA processing 3.7% (2/54) 5.15 0.00147 0.025589
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.7% (2/54) 5.61 0.000778 0.028792
GO:0006788 heme oxidation 1.85% (1/54) 8.61 0.002558 0.034421
GO:0004392 heme oxygenase (decyclizing) activity 1.85% (1/54) 8.61 0.002558 0.034421
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1.85% (1/54) 8.61 0.002558 0.034421
GO:0006353 DNA-templated transcription, termination 1.85% (1/54) 8.61 0.002558 0.034421
GO:0006396 RNA processing 5.56% (3/54) 3.91 0.001071 0.035229
GO:0009451 RNA modification 3.7% (2/54) 5.29 0.001216 0.035985
GO:0034470 ncRNA processing 3.7% (2/54) 4.48 0.003673 0.047267
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.068 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_37 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_85 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_87 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_94 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_125 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.068 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_177 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_190 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_237 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_175 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_205 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_241 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_251 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_1 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_34 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_107 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_189 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_224 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_225 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_263 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_2 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_143 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_168 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.092 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_293 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_326 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_343 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.048 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_183 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_162 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_284 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_299 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_65 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_159 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_161 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_186 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_234 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_287 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_418 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_481 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_163 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_264 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_294 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_364 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_27 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.046 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_68 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_117 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_147 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_216 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_231 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.059 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_268 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_279 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_115 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_117 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.062 Archaeplastida Compare
Vitis vinifera HCCA Cluster_156 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_208 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_235 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_240 0.021 Archaeplastida Compare
Sequences (54) (download table)

InterPro Domains

GO Terms

Family Terms