AMTR_s00009p00258320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.300

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase alpha subunit


Gene families : OG0004605 (Archaeplastida) Phylogenetic Tree(s): OG0004605_tree ,
OG_05_0003994 (LandPlants) Phylogenetic Tree(s): OG_05_0003994_tree ,
OG_06_0005521 (SeedPlants) Phylogenetic Tree(s): OG_06_0005521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00258320
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT2G38040 CAC3 acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 0.06 Archaeplastida
Cre12.g519100 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 Archaeplastida
Gb_31070 No alias carboxyltransferase subunit alpha of polymeric... 0.04 Archaeplastida
MA_39567g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c19_7430V3.1 No alias acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 0.05 Archaeplastida
Pp3c21_4300V3.1 No alias acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 0.03 Archaeplastida
Pp3c22_4730V3.1 No alias acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 0.03 Archaeplastida
Solyc09g013080.3.1 No alias carboxyltransferase subunit alpha of polymeric... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0009317 acetyl-CoA carboxylase complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003852 2-isopropylmalate synthase activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009098 leucine biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0070402 NADPH binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001095 Acetyl_CoA_COase_a_su 101 244
No external refs found!