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  5. LOC_Os09g04670.1

LOC_Os09g04670.1


Description : RNA editing factor (MORF)


Gene families : OG0006091 (Archaeplastida) Phylogenetic Tree(s): OG0006091_tree ,
OG_05_0004143 (LandPlants) Phylogenetic Tree(s): OG_05_0004143_tree ,
OG_06_0002547 (SeedPlants) Phylogenetic Tree(s): OG_06_0002547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g04670.1
Cluster HCCA: Cluster_341


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003937 IMP cyclohydrolase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!