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  5. LOC_Os09g29760.1

LOC_Os09g29760.1


Description : Protein WHATS THIS FACTOR 1 OS=Zea mays (sp|b6ttv8|wtf1_maize : 122.0)


Gene families : OG0001104 (Archaeplastida) Phylogenetic Tree(s): OG0001104_tree ,
OG_05_0010094 (LandPlants) Phylogenetic Tree(s): OG_05_0010094_tree ,
OG_06_0008344 (SeedPlants) Phylogenetic Tree(s): OG_06_0008344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29760.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Archaeplastida
GSVIVT01031655001 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 Archaeplastida
Smo422954 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e010008_P001 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021099 PORR_domain 65 385
No external refs found!