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  5. AMTR_s00011p00235020

AMTR_s00011p00235020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.123

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0025914 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024241 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00235020
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.05 Archaeplastida
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.04 Archaeplastida
GSVIVT01023788001 No alias Syntaxin-112 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035559001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.1 Archaeplastida
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.07 Archaeplastida
MA_99482g0010 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Smo130326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.08 Archaeplastida
Solyc01g109750.2.1 No alias SYP1-group Qa-type SNARE component 0.05 Archaeplastida
Solyc02g085090.1.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Solyc06g053760.3.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.07 Archaeplastida
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000247 C-8 sterol isomerase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006696 ergosterol biosynthetic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008204 ergosterol metabolic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044107 cellular alcohol metabolic process IEP Neighborhood
BP GO:0044108 cellular alcohol biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097384 cellular lipid biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1902652 secondary alcohol metabolic process IEP Neighborhood
BP GO:1902653 secondary alcohol biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 209 271
IPR006011 Syntaxin_N 43 148
No external refs found!