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Description : PAP8/TAC6 cofactor of plastid-encoded RNA polymerase
Gene families : OG0007314 (Archaeplastida) Phylogenetic Tree(s): OG0007314_tree ,
OG_05_0006292 (LandPlants) Phylogenetic Tree(s): OG_05_0006292_tree ,
OG_06_0006139 (SeedPlants) Phylogenetic Tree(s): OG_06_0006139_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os12g01950.1 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01008807001 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.04 | Archaeplastida | |
| Zm00001e023958_P002 | No alias | No annotation | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Neighborhood |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| MF | GO:0050661 | NADP binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |