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  5. Smo163805

Smo163805


Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.prohibitin component


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0003215 (LandPlants) Phylogenetic Tree(s): OG_05_0003215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo163805
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00071p00140730 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00079p00162380 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.07 Archaeplastida
AT5G40770 ATPHB3, PHB3 prohibitin 3 0.1 Archaeplastida
Cpa|evm.model.tig00000404.42 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
GSVIVT01001841001 No alias Prohibitin-3, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_24064 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g38900.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.04 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10182777g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c25_1160V3.1 No alias prohibitin 6 0.06 Archaeplastida
Pp3c5_6150V3.1 No alias prohibitin 2 0.02 Archaeplastida
Solyc10g008140.3.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g010190.1.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 Archaeplastida
Zm00001e041021_P001 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 33 210
No external refs found!