1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo408201

Smo408201


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo408201
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.08 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.02 Archaeplastida
AT1G75780 TUB1 tubulin beta-1 chain 0.02 Archaeplastida
AT2G29550 TUB7 tubulin beta-7 chain 0.04 Archaeplastida
AT5G12250 TUB6 beta-6 tubulin 0.03 Archaeplastida
AT5G23860 TUB8 tubulin beta 8 0.03 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.04 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.03 Archaeplastida
Cpa|evm.model.tig00001067.6 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.01 Archaeplastida
Gb_18746 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Gb_29799 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_30905 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os01g18050.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os01g59150.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os02g07060.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 Archaeplastida
Pp3c2_26580V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Smo79202 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
Zm00001e022571_P001 No alias Tubulin beta-4 chain OS=Eleusine indica... 0.02 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!