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  5. Smo446951

Smo446951


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein


Gene families : OG0000907 (Archaeplastida) Phylogenetic Tree(s): OG0000907_tree ,
OG_05_0000738 (LandPlants) Phylogenetic Tree(s): OG_05_0000738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo446951
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
AT5G47480 No alias RGPR-related 0.07 Archaeplastida
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01018158001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 Archaeplastida
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.02 Archaeplastida
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida
MA_10427360g0010 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 Archaeplastida
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Pp3c12_25260V3.1 No alias RGPR-related 0.04 Archaeplastida
Pp3c4_2860V3.1 No alias RGPR-related 0.01 Archaeplastida
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
Zm00001e013404_P001 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 Archaeplastida
Zm00001e025399_P002 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida
Zm00001e029805_P005 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR024340 Sec16_CCD 390 485
No external refs found!