AMTR_s00021p00170620 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.122

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000167 (Archaeplastida) Phylogenetic Tree(s): OG0000167_tree ,
OG_05_0001238 (LandPlants) Phylogenetic Tree(s): OG_05_0001238_tree ,
OG_06_0001726 (SeedPlants) Phylogenetic Tree(s): OG_06_0001726_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00170620
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AT1G35490	No alias	bZIP family transcription factor	0.04	Archaeplastida
AT2G40620	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	Archaeplastida
GSVIVT01001783001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.06	Archaeplastida
LOC_Os01g11350.1	No alias	transcription factor (bZIP)	0.04	Archaeplastida
LOC_Os01g55150.1	No alias	transcription factor (bZIP)	0.04	Archaeplastida
LOC_Os02g14910.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
LOC_Os03g03550.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
LOC_Os10g38820.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
LOC_Os12g09250.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Pp3c7_23340V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	Archaeplastida
Solyc01g110480.4.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc07g062710.4.1	No alias	No annotation	0.02	Archaeplastida
Solyc11g020950.3.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc12g010800.2.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Zm00001e001587_P001	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Zm00001e002183_P001	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Zm00001e014321_P001	No alias	transcription factor (bZIP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004020	adenylylsulfate kinase activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
BP	GO:0006020	inositol metabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006897	endocytosis	IEP	Neighborhood
BP	GO:0006909	phagocytosis	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Neighborhood
BP	GO:0009245	lipid A biosynthetic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Neighborhood
MF	GO:0019213	deacetylase activity	IEP	Neighborhood
BP	GO:0019310	inositol catabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046164	alcohol catabolic process	IEP	Neighborhood
BP	GO:0046174	polyol catabolic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046493	lipid A metabolic process	IEP	Neighborhood
MF	GO:0050113	inositol oxygenase activity	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0098657	import into cell	IEP	Neighborhood
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Neighborhood
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004827	bZIP	152	189

External Links

No external refs found!

AMTR_s00021p00170620 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation