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  5. AMTR_s00022p00043220

AMTR_s00022p00043220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.22

No description available


Gene families : OG0000750 (Archaeplastida) Phylogenetic Tree(s): OG0000750_tree ,
OG_05_0000441 (LandPlants) Phylogenetic Tree(s): OG_05_0000441_tree ,
OG_06_0000262 (SeedPlants) Phylogenetic Tree(s): OG_06_0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00043220
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT2G23690 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 Archaeplastida
GSVIVT01013456001 No alias No description available 0.04 Archaeplastida
Gb_01099 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_29302 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g09970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g55880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g41940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10165933g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10427270g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_119175g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4968862g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g109250.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc02g089990.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g082960.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e005612_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030501_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037548_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 180
No external refs found!