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  5. Solyc01g101195.1.1

Solyc01g101195.1.1


Description : Vetispiradiene synthase 1 OS=Solanum tuberosum (sp|q9xj32|vtss1_soltu : 175.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 46.4)


Gene families : OG0000037 (Archaeplastida) Phylogenetic Tree(s): OG0000037_tree ,
OG_05_0000011 (LandPlants) Phylogenetic Tree(s): OG_05_0000011_tree ,
OG_06_0000002 (SeedPlants) Phylogenetic Tree(s): OG_06_0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g101195.1.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g24640.1 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida
MA_86213g0010 No alias mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 13 52
No external refs found!