Solyc02g077960.3.1

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0085471 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g077960.3.1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.04	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.06	Archaeplastida
AT5G60850	OBP4	OBF binding protein 4	0.04	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.07	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g09720.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os05g36900.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os07g48570.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_939289g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c13_21190V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c16_6460V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Pp3c6_13355V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Smo29563	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e000526_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e001988_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e004809_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.09	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e012437_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.09	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.1	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e032133_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e034454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	38	92

External Links

No external refs found!

Solyc02g077960.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation