1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g078390.3.1

Solyc04g078390.3.1


Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001807 (Archaeplastida) Phylogenetic Tree(s): OG0001807_tree ,
OG_05_0001273 (LandPlants) Phylogenetic Tree(s): OG_05_0001273_tree ,
OG_06_0000732 (SeedPlants) Phylogenetic Tree(s): OG_06_0000732_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078390.3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
MA_119267g0010 No alias SLY-type gibberellin signal transducer. component F-box... 0.05 Archaeplastida
Zm00001e000792_P001 No alias SLY-type gibberellin signal transducer. component F-box... 0.06 Archaeplastida
Zm00001e038799_P001 No alias SLY-type gibberellin signal transducer. component F-box... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 82 121
No external refs found!