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  5. Solyc05g007450.3.1

Solyc05g007450.3.1


Description : component ORC6 of origin recognition complex


Gene families : OG0004261 (Archaeplastida) Phylogenetic Tree(s): OG0004261_tree ,
OG_05_0004739 (LandPlants) Phylogenetic Tree(s): OG_05_0004739_tree ,
OG_06_0008376 (SeedPlants) Phylogenetic Tree(s): OG_06_0008376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007450.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00143030 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.1 Archaeplastida
Cpa|evm.model.tig00001041.20 No alias Cell cycle.interphase.DNA... 0.04 Archaeplastida
Cre06.g285650 No alias Cell cycle.interphase.DNA... 0.06 Archaeplastida
GSVIVT01020002001 No alias Cell cycle.interphase.DNA... 0.15 Archaeplastida
Gb_08441 No alias component ORC6 of origin recognition complex 0.05 Archaeplastida
Gb_23047 No alias component ORC6 of origin recognition complex 0.03 Archaeplastida
MA_112539g0010 No alias component ORC6 of origin recognition complex 0.1 Archaeplastida
Mp8g00870.1 No alias component ORC6 of origin recognition complex 0.14 Archaeplastida
Pp3c13_2030V3.1 No alias origin recognition complex protein 6 0.06 Archaeplastida
Smo25439 No alias Cell cycle.interphase.DNA... 0.02 Archaeplastida
Zm00001e035618_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005664 nuclear origin of replication recognition complex IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000444 MIS12/MIND type complex IEP Neighborhood
CC GO:0000818 nuclear MIS12/MIND complex IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0042575 DNA polymerase complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043625 delta DNA polymerase complex IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008721 ORC6 3 91
No external refs found!