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AT1G01350


Description : Zinc finger (CCCH-type/C3HC4-type RING finger) family protein


Gene families : OG0005904 (Archaeplastida) Phylogenetic Tree(s): OG0005904_tree ,
OG_05_0007631 (LandPlants) Phylogenetic Tree(s): OG_05_0007631_tree ,
OG_06_0009952 (SeedPlants) Phylogenetic Tree(s): OG_06_0009952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G01350
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Mp4g00280.1 No alias Zinc finger CCCH domain-containing protein 51... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
BP GO:0016578 histone deubiquitination IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP Neighborhood
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
MF GO:0035064 methylated histone binding IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0047012 sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0051011 microtubule minus-end binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
MF GO:0140030 modification-dependent protein binding IEP Neighborhood
MF GO:0140034 methylation-dependent protein binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 201 226
No external refs found!