- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no hits & (original description: none)
Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc05g054340.4.1 | |
| Cluster | HCCA: Cluster_244 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc04g008205.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Solyc05g009750.1.1 | No alias | Putative late blight resistance protein homolog R1B-12... | 0.05 | Archaeplastida | |
| Solyc05g009760.3.1 | No alias | Putative late blight resistance protein homolog R1B-16... | 0.06 | Archaeplastida | |
| Solyc05g043420.2.1 | No alias | Putative late blight resistance protein homolog R1B-17... | 0.06 | Archaeplastida | |
| Solyc06g008785.1.1 | No alias | Putative late blight resistance protein homolog R1B-17... | 0.04 | Archaeplastida | |
| Solyc06g064720.1.1 | No alias | Putative late blight resistance protein homolog R1B-12... | 0.03 | Archaeplastida | |
| Solyc09g098100.4.1 | No alias | Putative late blight resistance protein homolog R1B-16... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Neighborhood |
| MF | GO:0004096 | catalase activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| MF | GO:0050080 | malonyl-CoA decarboxylase activity | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Neighborhood |
| BP | GO:0071804 | cellular potassium ion transport | IEP | Neighborhood |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |