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  5. AMTR_s00025p00238590

AMTR_s00025p00238590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.360

Description : Polyamine metabolism.spermidine/spermine.degradation.polyamine oxidase


Gene families : OG0001202 (Archaeplastida) Phylogenetic Tree(s): OG0001202_tree ,
OG_05_0000739 (LandPlants) Phylogenetic Tree(s): OG_05_0000739_tree ,
OG_06_0001184 (SeedPlants) Phylogenetic Tree(s): OG_06_0001184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00238590
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Gb_23546 No alias cytosolic polyamine oxidase (PAO1) 0.03 Archaeplastida
Gb_35100 No alias cytosolic polyamine oxidase (PAO1) 0.03 Archaeplastida
MA_8147193g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c14_7330V3.1 No alias polyamine oxidase 1 0.02 Archaeplastida
Solyc01g087590.3.1 No alias cytosolic polyamine oxidase (PAO1) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 208 434
IPR002937 Amino_oxidase 18 88
No external refs found!