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  5. Solyc08g081290.4.1

Solyc08g081290.4.1


Description : transcription factor (ARID)


Gene families : OG0001021 (Archaeplastida) Phylogenetic Tree(s): OG0001021_tree ,
OG_05_0000687 (LandPlants) Phylogenetic Tree(s): OG_05_0000687_tree ,
OG_06_0001952 (SeedPlants) Phylogenetic Tree(s): OG_06_0001952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081290.4.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G13880 No alias ELM2 domain-containing protein 0.03 Archaeplastida
AT1G26580 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
MA_10429133g0010 No alias transcription factor (ARID) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001606 ARID_dom 52 118
No external refs found!