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  5. Solyc09g091240.4.1

Solyc09g091240.4.1


Description : manganese/calcium cation transporter (BICAT)


Gene families : OG0002115 (Archaeplastida) Phylogenetic Tree(s): OG0002115_tree ,
OG_05_0007499 (LandPlants) Phylogenetic Tree(s): OG_05_0007499_tree ,
OG_06_0007338 (SeedPlants) Phylogenetic Tree(s): OG_06_0007338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091240.4.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.07 Archaeplastida
Cre02.g084350 No alias Solute transport.carrier-mediated transport.PAM71... 0.01 Archaeplastida
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 Archaeplastida
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.08 Archaeplastida
GSVIVT01029035001 No alias Solute transport.carrier-mediated transport.PAM71... 0.14 Archaeplastida
Gb_24383 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
LOC_Os01g12220.1 No alias manganese/calcium cation transporter (BICAT) 0.08 Archaeplastida
LOC_Os11g34180.1 No alias manganese/calcium cation transporter (BICAT) 0.11 Archaeplastida
MA_9249169g0010 No alias manganese/calcium cation transporter (BICAT) 0.02 Archaeplastida
Mp5g13170.1 No alias manganese/calcium cation transporter (BICAT) 0.07 Archaeplastida
Mp6g21360.1 No alias manganese/calcium cation transporter (BICAT) 0.04 Archaeplastida
Pp3c2_28570V3.1 No alias Uncharacterized protein family (UPF0016) 0.08 Archaeplastida
Pp3c7_26970V3.1 No alias Uncharacterized protein family (UPF0016) 0.06 Archaeplastida
Zm00001e008707_P003 No alias manganese/calcium cation transporter (BICAT) 0.03 Archaeplastida
Zm00001e026075_P001 No alias manganese/calcium cation transporter (BICAT) 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001727 Gdt1 157 235
IPR001727 Gdt1 287 360
No external refs found!