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  4. Sequence
  5. Solyc11g070080.1.1

Solyc11g070080.1.1


Description : no hits & (original description: none)


Gene families : OG0000377 (Archaeplastida) Phylogenetic Tree(s): OG0000377_tree ,
OG_05_0000243 (LandPlants) Phylogenetic Tree(s): OG_05_0000243_tree ,
OG_06_0016924 (SeedPlants) Phylogenetic Tree(s): OG_06_0016924_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g070080.1.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G13510 No alias Protein of Unknown Function (DUF239) 0.04 Archaeplastida
GSVIVT01003358001 No alias No description available 0.03 Archaeplastida
GSVIVT01013810001 No alias No description available 0.03 Archaeplastida
GSVIVT01026331001 No alias No description available 0.04 Archaeplastida
GSVIVT01026339001 No alias No description available 0.03 Archaeplastida
GSVIVT01035338001 No alias No description available 0.07 Archaeplastida
LOC_Os01g36660.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g59240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g28000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g10920.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c10_6890V3.1 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
Pp3c6_29500V3.1 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
Solyc01g081570.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g071590.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006081_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016772_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020747_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025875_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037003_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 31 116
IPR004314 Neprosin 151 370
No external refs found!