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  5. Solyc11g071300.2.1

Solyc11g071300.2.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0002939 (SeedPlants) Phylogenetic Tree(s): OG_06_0002939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071300.2.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.14 Archaeplastida
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.02 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.12 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008402001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.13 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.17 Archaeplastida
Gb_06045 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_17134 No alias Transcription factor MYB3R-1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.19 Archaeplastida
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp1g08640.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.06 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.04 Archaeplastida
Smo437219 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo80215 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e031356_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 48 92
No external refs found!