Solyc11g072980.1.1

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0004454 (LandPlants) Phylogenetic Tree(s): OG_05_0004454_tree ,
OG_06_0002864 (SeedPlants) Phylogenetic Tree(s): OG_06_0002864_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g072980.1.1
Cluster	HCCA: Cluster_261

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00234760	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.06	Archaeplastida
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.04	Archaeplastida
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.03	Archaeplastida
AT5G43760	KCS20	3-ketoacyl-CoA synthase 20	0.03	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.04	Archaeplastida
GSVIVT01013708001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
GSVIVT01022919001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
GSVIVT01026270001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
GSVIVT01034244001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Gb_15649	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os09g19650.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_309409g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.03	Archaeplastida
Pp3c3_31430V3.1	No alias	3-ketoacyl-CoA synthase 4	0.03	Archaeplastida
Smo75021	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.07	Archaeplastida
Solyc06g053870.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc09g083050.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e000476_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e001847_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e032463_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	331	412
IPR013601	FAE1_typ3_polyketide_synth	26	313

External Links

No external refs found!

Solyc11g072980.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation