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  5. Solyc12g005920.2.1

Solyc12g005920.2.1


Description : fimbrin actin-crosslinking factor


Gene families : OG0001003 (Archaeplastida) Phylogenetic Tree(s): OG0001003_tree ,
OG_05_0001487 (LandPlants) Phylogenetic Tree(s): OG_05_0001487_tree ,
OG_06_0001278 (SeedPlants) Phylogenetic Tree(s): OG_06_0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005920.2.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000881.31 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR001715 CH-domain 515 616
IPR001715 CH-domain 393 495
IPR001715 CH-domain 267 368
IPR001715 CH-domain 150 236
No external refs found!