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  5. Solyc12g006540.2.1

Solyc12g006540.2.1


Description : catalytic component SEC11 of SPC endoplasmic signal peptidase complex


Gene families : OG0002928 (Archaeplastida) Phylogenetic Tree(s): OG0002928_tree ,
OG_05_0003081 (LandPlants) Phylogenetic Tree(s): OG_05_0003081_tree ,
OG_06_0003272 (SeedPlants) Phylogenetic Tree(s): OG_06_0003272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006540.2.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00012260 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.endomembrane... 0.03 Archaeplastida
Cpa|evm.model.tig00000863.20 No alias Protein modification.peptide maturation.endomembrane... 0.02 Archaeplastida
Cre09.g406800 No alias Protein modification.peptide maturation.endomembrane... 0.05 Archaeplastida
Pp3c10_16090V3.1 No alias Peptidase S24/S26A/S26B/S26C family protein 0.05 Archaeplastida
Pp3c14_17270V3.1 No alias Peptidase S24/S26A/S26B/S26C family protein 0.02 Archaeplastida
Smo109521 No alias Protein modification.peptide maturation.endomembrane... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071569 protein ufmylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015927 Peptidase_S24_S26A/B/C 53 104
No external refs found!