Solyc12g056590.2.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g056590.2.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00143340	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00021p00184450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00129p00119770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G14230	RAP2.2	related to AP2 2	0.04	Archaeplastida
AT3G16770	ERF72, EBP, ATEBP, RAP2.3	ethylene-responsive element binding protein	0.02	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013920001	No alias	No description available	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.08	Archaeplastida
Gb_07949	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.03	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24329	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34848	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_36622	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g55520.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g09810.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os12g39330.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_6677438g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_8574268g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_88g0020	No alias	transcription factor (DREB)	0.05	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c14_3280V3.1	No alias	cytokinin response factor 2	0.03	Archaeplastida
Pp3c27_1350V3.1	No alias	ERF domain protein 12	0.03	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c4_2680V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Solyc01g065980.4.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.07	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g012980.1.1	No alias	Ethylene-responsive transcription factor ERF012...	0.05	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e003061_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Zm00001e003707_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e006139_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.02	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	115	164

External Links

No external refs found!

Solyc12g056590.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation