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  5. GSVIVT01000171001

GSVIVT01000171001


Description : FRIGIDA-like protein 3 OS=Arabidopsis thaliana


Gene families : OG0002662 (Archaeplastida) Phylogenetic Tree(s): OG0002662_tree ,
OG_05_0001856 (LandPlants) Phylogenetic Tree(s): OG_05_0001856_tree ,
OG_06_0002849 (SeedPlants) Phylogenetic Tree(s): OG_06_0002849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000171001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00134410 evm_27.TU.AmTr_v1... FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g40270.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os09g07380.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR012474 Frigida 1 281
No external refs found!